# Mar Roca Cugat – Curriculum Vitae & Portfolio
> Graduate researcher in toxicology at Maastricht University passionate about cell biology, toxicology, genomics, and bio-image informatics. Active open-source developer building multi-agent research pipelines, automated laboratory analysis workflows, and embedded IoT tools. Experienced in academic governance and educational leadership within the Faculty of Health, Medicine and Life Sciences (FHML).

This document follows the [llmstxt.org](https://llmstxt.org/) specification to provide Large Language Models (LLMs), AI agents, and web crawlers with a structured index of Mar Roca Cugat's curriculum vitae, publications, research projects, and background.

## Core Documents & Full Context
- [Complete Curriculum Vitae (Markdown)](./cv.md): Full comprehensive CV in GitHub-flavored Markdown detailing all research experience, projects, skills, education, and awards.
- [Full LLM Context (Full Text)](./llms-full.txt): Complete consolidated plain-text document of all portfolio items and credentials for single-prompt ingestion.
- [Canonical Dataset (JSON)](./data.json): Complete structured machine-readable JSON dataset containing all raw entries, categories, and proficiency levels.

## Key Projects & Published Research
- [Transwell Image Processing Scripts](https://github.com/Peiprjs/Transwell-Image-Processing-Scripts): Automated image processing scripts designed for quantifying and analyzing Transwell migration and invasion assays. Published with open-access archival via CERN/Zenodo (DOI: 10.5281/ZENODO.20741673).
- [Imaging Cardiac Arrhythmia in Zebrafish Genetic Disease Models](https://www.protocols.io/view/imaging-cardiac-arrhythmia-in-genetic-disease-mode-yxmvm1j75v3p/v1): Co-authored standardized open-access laboratory protocol detailing high-resolution optical imaging of cardiac arrhythmia in zebrafish embryo disease models (DOI: 10.17504/protocols.io.yxmvm1j75v3p/v1).
- [Predator-Eater: Predatory Journal Detector](https://github.com/Peiprjs/Predator-Eater): A cross-browser extension for Firefox and Google Chrome that automatically detects and alerts researchers when viewing potentially predatory academic journals.
- [TCGA-CDK-Analysis: Genomics Data Pipeline](https://github.com/Peiprjs/TCGA-CDK-analysis): Computational genomics and transcriptomics analysis investigating Cyclin-Dependent Kinases (CDKs) across The Cancer Genome Atlas (TCGA) datasets.
- [Staphylococcus Aureus Sampling Protocol](https://www.protocols.io): Peer-reviewed open-access methodology protocol covering sampling, isolation, and processing of Staphylococcus Aureus cultures (DOI: dx.doi.org/10.17504/protocols.io.81wgb6pk1lpk/v10).
- [Autonomous Multi-Agent Literature Review System](./cv.md): Local LLM-driven multi-agent pipeline (CrewAI & lightweight local models) for conducting systematic scoping reviews, featuring automated RIS citation exports for Zotero, Obsidian knowledge vault generation, and an interactive Streamlit dashboard.

## Professional Experience & Academic Governance
- [Laboratory and Teaching Assistant](https://www.maastrichtuniversity.nl): Maastricht University (Onderwijsinstituut FHML) - Assisting in practical laboratory sessions, guiding undergraduate students in biomedical techniques, and digitizing standardized experimental protocols for the Faculty of Health, Medicine and Life Sciences.
- [Head of Education](https://www.maastrichtuniversity.nl): Study Association Helix - Representing biomedical sciences student interests, managing educational quality assurance initiatives, and collaborating with faculty administration on curriculum development.
- [Department Co-Manager & Software Developer](https://github.com/PGamerX-Legacy/muser): PGamerX Legacy - Co-managed the automation software development department and engineered open-source applications and high-availability Discord bots for community and developer workflows.
- [Technical Support Agent](./cv.md): Something Host - Provided technical support, troubleshooting, and server deployment assistance for cloud and web hosting infrastructure clients.

## Online Profiles & Identifiers
- [Interactive Web Application](https://cv.peiphy.xyz): Live responsive web portfolio with instant client-side filtering, category navigation, and custom view link generation.
- [GitHub Profile](https://github.com/peiprjs): Open-source repositories, developer tooling, and laboratory workflows.
- [LinkedIn Profile](https://www.linkedin.com/in/mar-roca-cugat/): Professional network and career updates.
- [Google Scholar Profile](https://scholar.google.com/citations?user=ocdBqTwAAAAJ): Academic profile and citations.
- [ORCID Record](https://orcid.org/0000-0001-8796-8396): Open Researcher and Contributor ID (0000-0001-8796-8396).